miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Saccoglossus kowalevskii
ABOUT THIS RECORD
ID:
MNEST034900
species:
Saccoglossus kowalevskii
source:
miRBase, original name:
sko-mir-2006
(
MI0017577
)
Taxonomy by NCBI:
Saccoglossus kowalevskii
Saccoglossus
Harrimaniidae
Enteropneusta
Hemichordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAGCACACTACATAGCGGTGC
miRNA*
ATCGCTATCGTGTGTTCTTGT
mismatches:
2
bulges:
2
View larger
pre-miRNA
ATGGAATTGAATGCATGTGCGGTATC
ATCGCTATCGTGTGTTCTTGT
GTGTCTGTACAAC
AAGCACACTACATAGCGGTGC
TTCCACGCACGTAAATCTA
dot-bracket secondary structure
...........(((.((((.((...(
((((((((.((((((.(((((
(((....))).))
))).)))).))))))))))).
..)).)))).)))......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M,
Evol Dev. 13:15-27(2011).
,
"microRNA complements in deuterostomes: origin and evolution of microRNAs"